In industrial economics, organizations create value through saving. Therefore, creating value depended more on industrial competence and capital budgeting; while in knowledge-based economics, the only creating value method is accepting innovation of a business. In these organizations creating value depends on organizational knowledge, innovation process, and intellectual resources and human resources creativity. The sample group for the present research is staffs having BA and higher degree or faculty members of Bonab IAU. For analyzing data gained from the sample, we made use of paired samples average test in order to investigate the existing and favorable situation and also Freidman test to rank effective factors in knowledge management system. The results show that the existing situation of effective factors on implementation of knowledge management system was not at a suitable level and has a significance difference with its favorable level. On the basis of the results gained from Freidman, the priority of effective variables on implementation of knowledge management system was not the similar and the priority of the variables is as follows: human resources, knowledge management strategy, organizational culture, leadership, information technology (IT) strategy and organizational structure.